Publications
For a more complete (updated) list of my articles see my Google Scholar or my Research Gate profiles.
Effects of flexibility in coarse-grained models for bovine serum albumin and immunoglobulin G. F. Hirschmann, H. Lopez, F. Roosen-Runge, T. Seydel, F. Schreiber, and M. Oettel. J. Phys. Chem. 158, 084112 (2023). doi:10.1063/5.0132493, paper:pdf. This article may be downloaded for personal use only. Any other use requires prior permission of the author and AIP Publishing. This article appeared in J. Phys. Chem. 158, 084112 (2023) and may be found at https://doi.org/10.1063/5.0132493.
Short-Time Transport Properties of Bidisperse Suspensions of Immunoglobulins and Serum Albumins Consistent with a Colloid Physics Picture. C. Beck, M. Grimaldo, H. Lopez, S. Da Vela, B. Sohmen, F. Zhang, M. Oettel, J-L. Barrat, F. Roosen-Runge, F. Schreiber, and T. Seydel. J. Phys. Chem. B 126, 7400-7408 (2022). doi:10.1021/acs.jpcb.2c02380
A microfluidic approach for synthesis and kinetic profiling of branched gold nanostructures. Q. Cai, V. Castagnola, L. Boselli, A. Moura, H. Lopez, W. Zhang, J. M. de Araujo and K. A. Dawson. Nanoscale Horizon 7, 288-298 (2022). doi:10.1039/d1nh00540e, paper:pdf
A nanoscale shape-discovery framework supporting systematic investigations of shape-dependent biological effects and immunomodulation. W. Zhang, H. Lopez, L. Boselli, P. Bigini, A. Perez-Potti, Z. Xie, V. Castagnola, Q. Cai, C. P. Silveira, J. M. de Araujo, L. Talamini, N. Panini, G. Ristagno, M. B. Violatto, S. Devineau, M. Monopoli, M. Salmona, V. A. Giannone, S. Lara, K. A. Dawson and Y. Yan. ACS Nano 16, 1547–1559 (2022). doi:10.1021/acsnano.1c10074, paper:pdf, data:m9.figshare.17429657 at figshare
In depth characterisation of the biomolecular coronas of polymer coated inorganic nanoparticles with differential centrifugal sedimentation. A. Perez-Potti, H. Lopez, B. Pelaz, A. Abdelmonem, M. G. Soliman, I. Schoen, P. M. Kelly, K. A. Dawson, W. J. Parak, Z. Krpetic and M. P. Monopoli. Scientific Reports 11, 6443 (2021). doi:10.1038/s41598-021-84029-8, paper:pdf
Impact of dynamic sub-populations within grafted chains on the protein binding and colloidal stability of PEGylated nanoparticles. D. R. Hristov, H. Lopez, Y. Ortin, K. O’Sullivan, K. A. Dawson and D. F. Brougham. Nanoscale 11, 5344-5355 (2021). doi:10.1039/D0NR08294E, paper:pdf
Classification and Biological Identity of Complex Nano Shapes. L. Boselli, H. Lopez, W. Zhang, Q. Cai, V. A. Giannone, J. Li, A. Moura, J. M. de Araujo, J. Cookman, V. Castagnola, Y. Yan and K. A. Dawson. Communications Materials 1, 35 (2020). doi:110.1038/s43246-020-0033-2, paper:pdf, data:m9.figshare.11948886 at figshare
A multiscale model of protein adsorption on a nanoparticle surface. D. Power, I. Rouse, S. Poggio, E. Brandt, H. Lopez, A. Lyubartsev and V. Lobaskin. Modelling and Simulation in Materials Science and Engineering 27, 084003 (2019). doi:10.1088/1361-651x/ab3b6e, paper:pdf.
Low-Resolution Models for the Interaction Dynamics of Coated Gold Nanoparticles with β2-microglobulin. G. Brancolini, H. Lopez, S. Corni and V. Tozzini. International Journal of Molecular Sciences 20, 3866 (2019). doi:10.3390/ijms20163866, paper:pdf.
Protein Short-Time Diffusion in a Naturally Crowded Environment. M. Grimaldo, H. Lopez, C. Beck, F. Roosen-Runge, M. Moulin, J. M. Devos, V. Laux, M. Hartlein, S. Da Vela, R. Schweins, A. Mariani, F. Zhang, J-L. Barrat, M. Oettel, V. T. Forsyth, T. Seydel, and F. Schreiber. Journal of Physical Chemistry Letters 10, 1709-1715 (2019). doi:10.1021/acs.jpclett.9b00345, paper:pdf.
Label-free In-Flow Detection of Receptor Recognition Motifs on the Biomolecular Corona of Nanoparticles. M. Gianneli, E. Polo, H. Lopez, V. Castagnola, T. Aastrup, and K. A. Dawson. Nanoscale 10, 5474-5481 (2018). doi:10.1039/C7NR07887K, paper:pdf.
Role of contact inhibition of locomotion and junctional mechanics in epithelial collective responses to injury. L. Coburn, I.-M. Schouwenaar, H. Lopez, A. Yap, V. Lobaskin, G. A. Gomez. Physical Biology 15, 024001 (2018). doi:10.1088/1478-3975/aa976b, paper:pdf.
Using single nanoparticle tracking obtained by nanophotonic force microscopy to simultaneously characterize nanoparticle size distribution and nanoparticle-surface interactions. D. R. Hristov, D. Ye, J. Medeiros de Araujo, C. Ashcroft, B. DiPaolo, R. Hart, C. Earhart, H. Lopez and K. A. Dawson. Nanoscale 9, 4524-4535 (2017). doi:10.1039/C6NR09331K, paper:pdf.
Contact inhibition of locomotion and mechanical cross-talk between cell-cell and cell-substrate adhesion determine the pattern of junctional tension in epithelial cell aggregates. L. Coburn, H. Lopez, B. J. Caldwell, E. Moussa, C. Yap, R. Priya, A. Noppe, A. P. Roberts, V. Lobaskin, Z. Neufeld and G. A. Gomez. Molecular Biology of the Cell 27, 3436-3448 (2016). doi:10.1091/mbc.E16-04-0226, paper:pdf.
Coarse-grained model of adsorption of blood plasma proteins onto nanoparticles. H. Lopez and V. Lobaskin. Journal of Chemical Physics 143, 243138 (2015). doi:10.1063/1.4936908, paper:pdf.
Continuous and discontinuous dynamic unbinding transitions in drawn film flow. M. Galvagno, D. Tseluiko, H. Lopez and U. Thiele. Physical Review Letters 112, 137803 (2014). doi:10.1103/PhysRevLett.112.137803, paper:pdf.
Gradient dynamics description for films of mixtures and suspensions: Dewetting triggered by coupled film height and concentration fluctuations. U. Thiele, D. Todorova, H. Lopez. Physical Review Letters 111, 117801 (2013). doi:10.1103/PhysRevLett.111.117801, paper:pdf.
Time-dependent boundary conditions for nanoscale electron devices: Application to classical and quantum simulators. G. Albareda, H. Lopez, X. Cartoixa, J. Sune and X. Oriols. Physical Review B 82, 085301 (2010). doi:10.1103/PhysRevB.82.085301, paper:pdf.
An adaptive SPH method for strong shocks. LDG. Sigalotti, H. Lopez and L. Trujillo. Journal of Computational Physics 228, 5888-5907 (2009).
High-frequency behavior of the Datta-Das Spin transistor. H. Lopez, X. Oriols, J. Sune and X. Cartoixa. Applied Physics Letters 93, 193502 (2008).
Spin-Dependent Injection Model for Monte Carlo Device Simulation. H. Lopez, X. Oriols, J. Sune and X. Cartoixa. Journal of Applied Physics 104, 073702 (2008).
Boundary conditions with Pauli exclusion and charge neutrality: application to the Monte Carlo simulation of ballistic nanoscale devices. H. Lopez</u>, G. Albareda, X. Cartoixa, J. Sune and X. Oriols. Journal of Computational Electronics 7, 213-216 (2008).
Adaptive kernel estimation and SPH tensile instability. LDG. Sigalotti and H. Lopez. Computers & Mathematics with Applications 55, 23-50 (2008).
Eigenstate fitting in the k.p method. H. Lopez, A. N. Chantis, J. Sune and X. Cartoixa. Journal of Computational Electronics 6, 195-198 (2007).
Entangled Trajectory Dynamics in the Husimi Representation. H. Lopez and A. Donoso. Journal of Chemical Physics 125, 154111 (2006).
Oscillation of viscous drops with smoothed particle hydrodynamics. H. Lopez and LDG. Sigalotti. Physical Review E 73, 051201 (2006).
A shock-capturing SPH scheme based on adaptive kernel estimation. LDG. Sigalotti, H. Lopez, A. Donoso, E. Sira and J. Klapp. Journal of Computational Physics 212, 124-149 (2006).
Adaptive kernel methods to simulate quantum phase space flow. H. Lopez and A. Donoso. Condensed Matter Physics 9, 351 (2006).
Leaf-cutter ant species (Hymenoptera: Atta) differ in the types of cues used to differentiate between self and others. J. V. Hernandez, W. Goitia, H. Lopez, A. Osio, A. Cabrera,C. Sainz and K. Jaffe. Animal Behaviour 71, 945-952 (2006).
Nestmate recognition signals of the ant Atta laevigata (Hymenoptera: Formicidae). J. V. Hernandez, H. Lopez and K. Jaffe. Journal of Insect Physiology 48, 287-295 (2002).